Estimated Prevalence and Incidence of Disease-Associated Human Papillomavirus Types Among 15- to 59-Year-Olds in the United States : Sexually Transmitted Diseases

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Estimated Prevalence and Incidence of Disease-Associated Human Papillomavirus Types Among 15- to 59-Year-Olds in the United States

Lewis, Rayleen M. MPH∗,†; Laprise, Jean-François PhD; Gargano, Julia W. PhD; Unger, Elizabeth R. MD, PhD§; Querec, Troy D. PhD§; Chesson, Harrell W. PhD; Brisson, Marc PhD; Markowitz, Lauri E. MD

Author Information
Sexually Transmitted Diseases 48(4):p 273-277, April 2021. | DOI: 10.1097/OLQ.0000000000001356

Human papillomavirus (HPV) is the most common sexually transmitted infection in the United States and causes several diseases, including anogenital warts and cancers.1–3 There are over 40 different types of mucosal HPV, and most HPV infections do not progress to disease.4 However, 2 HPV types, HPV 6 and 11, cause nearly all cases of anogenital warts,2 and high-risk (HR) types, defined based on their oncogenic potential, can cause cancer of the cervix, vulva, vagina, penis, anus, and oropharynx.3 Cervical cancer is the most common HPV-associated cancer globally.5 However, in the United States, oropharyngeal cancer is now the most common HPV-associated cancer as rates of oropharyngeal cancer are increasing, whereas rates of cervical cancer are decreasing because of screening and treatment of cervical precancers.6,7

Diseases caused by HPV (eg, genital warts, cancers) result in substantial morbidity and mortality in the United States, including approximately 196,000 cervical precancers8 and 35,900 HPV-attributable cancers9 occurring annually. Understanding the epidemiology of infections with disease-associated HPV types (ie, HPV types that can cause disease) can inform prevention and control efforts. Using nationally representative data and mathematical modeling, we provide updated estimates of the prevalence of infection, incidence of infection, and numbers of persons with prevalent and incident infections with any and disease-associated HPV types for US men and women.

MATERIALS AND METHODS

Data Source and Analytic Sample

The National Health and Nutrition Examination Survey (NHANES) is an ongoing cross-sectional survey administered by the National Center for Health Statistics at the Centers for Disease Control and Prevention designed to be nationally representative of the noninstitutionalized, civilian population living in the United States. Data collection includes an in-home interview, where demographic data are collected, and a medical examination in the Mobile Examination Center, where participants self-collect a cervicovaginal or penile swab. Detailed methods are provided elsewhere.10–12 Informed consent was obtained from all participants or their guardians. Data collection was approved by the National Center for Health Statistics Research Ethics Review Board.

Specimen Collection and Laboratory Methods

Cervicovaginal and penile self-collected swabs were shipped to and analyzed at Centers for Disease Control and Prevention using Research Use Only Roche Linear Array Assay (Roche Diagnostics, Indianapolis, IN). This assay uses L1 consensus PCR followed by type-specific hybridization for qualitative detection of 37 HPV types (HPV 6/11/16/18/26/31/33/35/39/40/42/45/51/52[XR]/53/54/55/56/58/59/61/62/64/66/67/68/69/70/71/72/73/81/82/83/84/89/IS39) and β-globin, an internal control for specimen adequacy.13,14 The analysis was restricted to participants with adequate samples (samples positive for HPV and/or β-globin).

HPV Type Categories

Twelve HPV types are defined as carcinogenic to humans (HPV 16/18/31/33/35/39/45/51/52/56/58/59, also known as group 1) by the International Agency for Research on Cancer (IARC).3 Commercially-available HPV tests used for clinical cervical cancer screening detect these 12 types, as well as HPV 66 (defined as possibly carcinogenic) and HPV 68 (defined as probably carcinogenic).3,15 Other disease-associated types, such as HPV 6/11 which cause most genital warts, are not carcinogenic. Due to type-specific associations with different HPV-associated diseases, we analyzed prevalence and incidence of several different type categories including: any HPV (any of 37 types detected using Linear Array), HPV 6/11, IARC group 1, 14HR (types detected by clinical HPV tests, IARC group 1 plus HPV 66/68), and disease-associated HPV (14HR plus HPV 6/11). For the purpose of this analysis, infection was defined as positivity for least one type in the respective HPV type category.

Statistical Analysis

Prevalence

Weighted prevalence of infection and corresponding confidence intervals (CI) were estimated overall and by sex for 15- to 59-year-olds and, for a subset of that age group, 15- to 24-year-olds, for each HPV category using Mobile Examination Center weights and complex survey analytic methods.16,17 The most recent NHANES data available to estimate national prevalence are from 2013–2016; these were used for all prevalence estimates. To provide estimates for 2018, consistent with an initiative to estimate overall national burden of STIs in that year,18 we assumed the HPV prevalence in 2013–2016 is comparable to prevalence in 2018 as suggested by previous research.19,20 Numbers of infected persons (in millions) per year and CIs were estimated by multiplying 2013–2016 prevalence and CIs by 2018 population totals for the entire US population based on the American Community Survey.21 Because this analysis is part of an effort to estimate national burden of STIs overall, rather than presenting conventional 95% CIs, 50% CIs were calculated to improve comparability with methods used to estimate other infections.18

Data management and analysis were performed in SAS 9.4 (SAS Institute, Cary, NC) and SAS-callable SUDAAN 11.0 (RTI International, Research Triangle Park, NC). Prevalence estimates were noted as unstable if the relative standard error was greater than 30%.

Incidence

Incidence of infection among 15- to 59-year-olds and 15- to 24-year-olds was estimated using the HPV Agent-based Dynamic model for Vaccination and Screening Evaluation (HPV-ADVISE), an individual-based transmission-dynamic type-specific model of multitype HPV infection. Originally developed to model HPV transmission in Canada,22 it has since been calibrated to model transmission in the United States using sexual behavior data from national surveys and HPV prevalence data from NHANES.23,24 This model has been used to inform HPV vaccination policy decisions in the United States.24–26 The HPV-ADVISE model performed 20 runs for 50 parameter sets, for a total of 1000 runs; results for each parameter set were averaged. Mean incidence (mean of the parameter set averages) and a 50% uncertainty interval (UI) per 10,000 persons in 2018 were estimated for HPV 6/11, IARC group 1, 14HR types, and disease-associated HPV. HPV-ADVISE was not designed to model all 37 HPV types (any HPV) detected using Linear Array. To estimate the incidence of any HPV infection, disease-associated HPV infection incidence and the 50% UI bounds were multiplied by sex-age group-specific adjustment factors equal to the ratio of prevalence point estimates of any HPV to disease-associated HPV estimated using NHANES data. All modeled incidences and 50% UIs were multiplied by the 2018 American Community Survey–based population totals to estimate the number of US persons in 2018 with an incident infection.

RESULTS

Estimated Prevalence

The HPV infection prevalences and numbers of persons with prevalent HPV infection are presented overall and by sex for 15- to 59-year-olds and 15- to 24-year-olds in Table 1. Because prevalences were calculated overall and separately by sex, estimates for women and men may not sum exactly to estimates for the total population. Among 15- to 59-year-olds, 2013–2016 prevalence of any HPV infection was 40.0% overall, 41.8% among men, and 38.4% among women. These prevalences correspond to 77.3 million persons overall, or 40.5 million men and 37.0 million women, with a prevalent HPV infection in 2018. Prevalence of disease-associated HPV infection was 22.0% overall, 24.2% in men, and 19.9% in women corresponding to 42.5 million persons, 23.4 million men, and 19.2 million women with an infection of at least 1 disease-associated HPV type in 2018. Prevalence point estimates of infections with all HPV categories in men were somewhat higher than women in 15- to 59-year-olds. Prevalence of 14HR infection was about 2.5 percentage points higher than estimates of IARC group 1 infection prevalence overall and among men and women.

TABLE 1 - Prevalence in 2013–2016 and Estimated Number of Persons With Prevalent Infection in 2018, Any HPV and Disease-Associated HPV Type Categories, NHANES
Age Group/HPV Type Category Total Men Women
Age 15–59 y N = 8005 n = 3784 n = 4221
Weighted prevalence (50% CI), 2013–2016
 Any 40.0 (39.2, 40.9) 41.8 (40.6, 42.9) 38.4 (37.6, 39.2)
 6/11 1.9 (1.7, 2.0) 2.6 (2.4, 2.9) 1.1 (1.0, 1.3)
 IARC group 1 18.5 (18.0, 19.0) 20.3 (19.6, 20.9) 16.9 (16.3, 17.5)
 14HR 21.0 (20.4, 21.6) 22.8 (22.1, 23.5) 19.3 (18.8, 19.9)
 Disease-associated 22.0 (21.4, 22.6) 24.2 (23.5, 25.0) 19.9 (19.4, 20.5)
Estimated number of persons with infection, in millions (50% CI), 2018
 Any 77.3 (75.7, 79.0) 40.5 (39.3, 41.5) 37.0 (36.3, 37.8)
 6/11 3.7 (3.3, 3.9) 2.5 (2.3, 2.8) 1.1 (1.0, 1.3)
 IARC group 1 35.7 (34.8, 36.7) 19.7 (19.0, 20.2) 16.3 (15.7, 16.9)
 14HR 40.6 (39.4, 41.7) 22.1 (21.4, 22.7) 18.6 (18.1, 19.2)
 Disease-associated 42.5 (41.4, 43.7) 23.4 (22.7, 24.2) 19.2 (18.7, 19.8)
Age 15–24 y N = 2118 n = 1056 n = 1062
Weighted prevalence (50% CI), 2013–2016
 Any 32.8 (31.9, 33.8) 25.6 (24.4, 26.8) 40.1 (38.7, 41.5)
 6/11 1.0 (0.9, 1.2) 1.0 (0.8, 1.3) 1.0 (0.7, 1.2)
 IARC group 1 17.4 (16.6, 18.3) 13.6 (12.7, 14.5) 21.2 (19.9, 22.6)
 14HR 20.5 (19.6, 21.5) 15.8 (14.9, 16.9) 25.2 (23.9, 26.6)
 Disease-associated 20.9 (19.9, 21.9) 16.3 (15.3, 17.3) 25.5 (24.1, 26.8)
Estimated number of persons with infection, in millions (50% CI), 2018
 Any 14.2 (13.8, 14.6) 5.7 (5.4, 5.9) 8.4 (8.2, 8.7)
 6/11 0.4 (0.4, 0.5) 0.2 (0.2, 0.3) 0.2 (0.1, 0.3)
 IARC group 1 7.5 (7.2, 7.9) 3.0 (2.8, 3.2) 4.5 (4.2, 4.8)
 14HR 8.8 (8.5, 9.3) 3.5 (3.3, 3.7) 5.3 (5.0, 5.6)
 Disease-associated 9.0 (8.6, 9.5) 3.6 (3.4, 3.8) 5.4 (5.1, 5.6)
Estimates for men and women may not sum to estimates for the total population.
Relative standard error > 30%.
NHANES, National Health and Nutrition Examination Survey; HPV, human papillomavirus; CI, confidence interval; HR, high risk HPV types; IARC (International Agency for Research on Cancer) group 1: HPV 16/18/31/33/35/39/45/51/52/56/58/59; 14HR, IARC group 1 and HPV 66/68; disease-associated, HPV 6/11/16/18/31/33/35/39/45/51/52/56/58/59/66/68.

In contrast to what was found in 15- to 59-year-olds, in the younger age group of 15- to 24-year-olds, most prevalence of infection point estimates were lower among men than women. Among 15- to 24-year-olds, prevalence of any HPV infection was 32.8% overall, 25.6% among men, and 40.1% among women, corresponding to 14.2, 5.7, and 8.4 million infected persons, men, and women, respectively, in 2018. Prevalence of disease-associated HPV infection was 20.9% overall, corresponding to 9.0 million infected persons in 2018 (3.6 million men and 5.4 million women). Prevalence of IARC group 1 infection was 13.6% in men and 21.2% in women and differed from 14HR infection prevalence by about 2 to 4 percentage points.

Estimated Incidence

Human papillomavirus infection incidences and numbers of persons with incident HPV infection in 2018 are presented overall and by sex for 15- to 59-year-olds and 15- to 24-year-olds in Table 2. Patterns of incidence by type category, sex, and age group were similar to patterns of prevalence. Among 15- to 59-year-olds, incidence of any HPV infection was 1222 per 10,000 persons, with 23.6 million persons acquiring any HPV infection in 2018. Incidence of disease-associated HPV infection was 672, 708, and 636 per 10,000 persons, men, and women, corresponding to 13.0, 6.9, and 6.1 million persons, men, and women with an incident infection. Similar to the pattern observed for prevalence among the same age group, 15- to 59-year-olds, men had somewhat higher incidence than women for most HPV categories.

TABLE 2 - Model-based Estimates of Annual Incidence Per 10,000 Persons and Number of Persons With an Incident Infection of Any HPV and Disease-Associated HPV Type Categories in 2018, HPV-ADVISE
Age Group/HPV Type Category Total Men Women
Age 15–59 y
Incidence per 10,000 persons (50% UI)
 Any 1222 (969, 1436) 1223 (983, 1332) 1227 (942, 1478)
 6/11 18 (12, 23) 17 (12, 21) 18 (11, 25)
 IARC group 1 587 (466, 681) 623 (501, 688) 552 (428, 657)
 14HR 669 (530, 784) 706 (567, 770) 632 (486, 763)
 Disease-associated 672 (533, 790) 708 (569, 771) 636 (488, 766)
Estimated number of persons with incident infection, in millions (50% UI)
 Any 23.6 (18.7, 27.8) 11.8 (9.5, 12.9) 11.8 (9.1, 14.3)
 6/11 0.3 (0.2, 0.4) 0.2 (0.1, 0.2) 0.2 (0.1, 0.2)
 IARC group 1 11.3 (9.0, 13.2) 6.0 (4.8, 6.7) 5.3 (4.1, 6.3)
 14HR 12.9 (10.2, 15.1) 6.8 (5.5, 7.5) 6.1 (4.7, 7.4)
 Disease-associated 13.0 (10.3, 15.3) 6.9 (5.5, 7.5) 6.1 (4.7, 7.4)
Age 15–24 y
Incidence per 10,000 persons (50% UI)
 Any 2566 (2130, 2833) 2342 (2004, 2613) 2804 (2331, 3309)
 6/11 37 (26, 47) 25 (18, 32) 50 (33, 71)
 IARC group 1 1432 (1186, 1559) 1308 (1108, 1474) 1559 (1303, 1831)
 14HR 1632 (1354, 1800) 1489 (1274, 1663) 1779 (1478, 2099)
 Disease-associated 1635 (1357, 1805) 1491 (1276, 1664) 1783 (1482, 2104)
Estimated number of persons with incident infection, in millions (50% UI)
 Any 11.1 (9.2, 12.2) 5.2 (4.4, 5.8) 5.9 (4.9, 7.0)
 6/11 0.2 (0.1, 0.2) 0.1 (0.0, 0.1) 0.1 (0.1, 0.1)
 IARC group 1 6.2 (5.1, 6.7) 2.9 (2.4, 3.3) 3.3 (2.7, 3.9)
 14HR 7.0 (5.8, 7.8) 3.3 (2.8, 3.7) 3.7 (3.1, 4.4)
 Disease-associated 7.1 (5.9, 7.8) 3.3 (2.8, 3.7) 3.8 (3.1, 4.4)
Note: Incidence of any HPV was calculated by multiplying the disease-associated HPV incidence and the 50% UI bounds by sex-age group-specific adjustment factors equal to the ratio of prevalence point estimates of any HPV to disease-associated HPV. Any HPV incidence among total population may not reflect weighted average of incidence among men and women.
HPV, human papillomavirus; HPV-ADVISE, HPV Agent-based Dynamic model for Vaccination and Screening Evaluation; UI, uncertainty interval; HR, high risk HPV types; IARC (International Agency for Research on Cancer) group 1: HPV 16/18/31/33/35/39/45/51/52/56/58/59; 14HR, IARC group 1 and HPV 66/68; disease-associated, HPV 6/11/16/18/31/33/35/39/45/51/52/56/58/59/66/68.

Among 15- to 24-year-olds, all incidence estimates were higher than among 15- to 59-year-olds, and women had higher incidence than men for all HPV categories. Incidence of any HPV infection was 2566 per 10,000 persons, equating to 11.1 million persons with an incident infection. Incidences of disease-associated HPV infection were 1635, 1491, and 1783 per 10,000 persons, men, and women. In 2018, 7.1 million persons (3.3 million men and 3.8 million women) acquired a disease-associated HPV type infection.

DISCUSSION

We provide national HPV infection prevalence estimates using data from both men and women and show that HPV is a common sexually transmitted infection with a prevalence of 40% among persons aged 15 to 59 years in the United States. We estimated that, in 2018, over 77 million persons had a prevalent infection. Disease-associated types were common with an estimated 23.4 million men and 19.2 million women having a prevalent infection with at least 1 disease-associated type in 2018. In addition, using a transmission-dynamic model of HPV,25,26 we estimated that in 2018 approximately 13 million persons in the United States (6.9 million men and 6.1 million women) acquired an HPV infection with a disease-associated HPV type.

The burden of each HPV category should be interpreted with respect to the potential sequelae caused by specific HPV types in each category. Burden of the 12 HR types in group 1 designated as human carcinogens by IARC can be interpreted as the burden of HPV that causes almost all HPV-attributable cancers. Burden of 14HR types reflects HPV that, in addition to causing almost all HPV-attributable cancers, would require follow-up in the clinical setting of cervical cancer screening; we note that the additional types detected by clinical HPV tests, which can cause cervical lesions but seldom cause cancer, contribute 2 to 4 percentage points to the prevalence estimates.15 Human papillomavirus 6/11 reflects the burden of infections that cause most anogenital warts.2 Therefore, the category of disease-associated HPV, which includes the HPV types detected during cervical cancer screening and that cause genital warts, encompasses the types responsible for a vast majority of HPV-associated diseases. Measures of prevalence of any HPV infection depend on the biologic sample and collection method, sensitivity of the assay used, and number of types detected by the assay. This should be taken into consideration when comparing prevalence estimates of any HPV infection across research studies.

In the overall age group of 15- to 59-year-olds, prevalences of infection with most HPV categories were 3 to 4 percentage points higher in men than women. In the younger group of 15- to 24-year-olds, most prevalences were 7 to 14 percentage points higher in women than men. We previously conducted more detailed analyses of sex-specific genital prevalence in different age groups in the United States, showing that men have higher prevalence overall, but that sex differences vary by age group. From the teens through mid-20s, women have higher HPV prevalences than men, but after the mid-20s, prevalences are higher among men than women.27 Similar age- and sex-specific differences were also seen in HPV infection incidence estimates in the present analysis. Sex differences in natural history and sexual behavior may contribute to the different sex-specific patterns found in prevalence and incidence among 15- to 59-year-olds and 15- to 24-year-olds.28,29

In 2006, the quadrivalent HPV vaccine that protects against HPV 6/11/16/18 was licensed in the United States and routinely recommended as a 3-dose series for women at ages 11 or 12 years (but could be started at age 9 years) with catch-up vaccination for 13- to 26-year-olds.30 Since the initiation of the national vaccination program, additional HPV vaccines have been licensed, the program has been expanded to men, and the recommended number of doses for some age groups has changed.31s–35s Currently, in the United States, vaccination is routinely recommended for both men and women at ages 11 or 12 years, with catch-up through age 26 years. Shared clinical decision-making is recommended regarding vaccination of persons aged 27 through 45 years. Since the end of 2016, all vaccine used in the United States has been the 9-valent vaccine, protecting against HPV 6/11/16/18/31/33/45/52/58 (2 HPV types that cause anogenital warts and 7 HR types that cause a majority of HPV-attributable cancers).35s Significant reductions in the prevalence of HPV types in the quadrivalent vaccine (HPV 6/11/16/18) have already been observed among adolescent and young adult women,20 which may explain the comparable prevalence of HPV 6/11 infection in men and women 15- to 24-year-olds where prevalences of infections with other HPV categories (which include HR types not targeted by the quadrivalent vaccine) were higher in women than men. As vaccinated persons age, vaccination coverage will increase among 15- to 59-year-olds, vaccine-type incidence and prevalence are expected to decrease, and sex differences will be attenuated.

We present HPV infection burden estimates for 2018, with updated data and methods compared with a published estimate for 2008. In this analysis, using 2013–2016 national data from both men and women, we estimated 77.3 million people in the United States had a prevalent HPV infection in 2018, including approximately 42.5 million people with at least one disease-associated HPV type. Previously, Satterwhite and colleagues,1 using 2003–2006 NHANES data from women only with the assumption that prevalence among men was comparable to women, estimated 79.1 million people had a prevalent HPV infection in 2008, a figure similar to our estimate for 2018. On the other hand, our estimate of 23.6 million people with an incident infection with any HPV in 2018 is notably higher than the 14.1 million estimated by the Satterwhite study for 2008. However, these incidence results are not directly comparable because of the differences in the models used. Our 2018 incidence was estimated using the HPV-ADVISE model, whereas the 2008 incidence estimates from the Satterwhite study were generated using age-specific HPV incidence rates from a different mathematical model of cervical HPV infection published by Canfell.36s That model produced estimates found to be consistent with US data for prevalence of 13 oncogenic HPV types.37s,38s Therefore, the Satterwhite estimate of 14.1 million persons with an incident infection in 2008 is more comparable to our estimate for 14 HR (12.9 million persons with an incident infection in 2018). Using these comparisons, our results are reasonably consistent with, but slightly lower than, previous estimates for HPV incidence.

Although our estimates are based on the first 4 years of nationally representative data from both men and women, as well as a well-published mathematical model, this study is subject to some limitations. First, we assumed prevalence of infection was comparable in 2013–2016 and 2018. In the 8 to 10 years after vaccine introduction in 2006, whereas vaccine-type HPV prevalence decreased dramatically in younger women, non–vaccine-type HPV prevalence remained stable in most age groups.19,20 This suggests there have not been substantial changes in the risk of HPV acquisition during this period. Second, to provide estimates of persons with a prevalent infection in the United States, we assumed the prevalence among the noninstitutionalized population (which excludes active duty military personnel, families of active duty military personnel living overseas, and all persons in supervised care or custody in institutional settings [eg, nursing facilities, prisons]) is similar to prevalence in the total population. Because HPV is common and a small proportion of Americans constitute the excluded populations, it is unlikely that these excluded populations would have a significant effect on national prevalence. Finally, presented incidences are modeled estimates and are not from empirical data.

This report includes our most recent estimates of HPV infection prevalence and incidence in the United States using data from national surveys and a mathematical model. Although most HPV infections will become undetectable, a portion of infections with disease-associated HPV types will progress to disease.4 This substantial burden of HPV highlights the need for continued monitoring of HPV-associated cancers through registries, monitoring of other HPV-associated diseases, cervical cancer screening, and HPV vaccination to monitor and prevent HPV-associated disease among persons in the United States.

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