Fishing for New Glomerular Disease-Related Genes : Journal of the American Society of Nephrology

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Fishing for New Glomerular Disease-Related Genes

Mangos, Steve; Reiser, Jochen

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Journal of the American Society of Nephrology 22(11):p 1960-1962, November 2011. | DOI: 10.1681/ASN.2011090928
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Identification of new disease-related genes contributing to various forms of glomerular pathobiology is a critical step leading to the development of novel treatments and therapies for kidney-related disorders. Significant progress toward this end has been realized by contributions from the Matrix Biology group at the Karolinska Institutet, led by Karl Tryggvason. Several years ago, gene-profiling methods were used to identify genes that show significantly elevated levels of expression in the renal corpuscle. A series of ensuing publications validated these findings with in vitro and in vivo methods, combined with extensive data-mining efforts to describe highly expressed transcripts and protein-protein interactions occurring in the glomerulus. The end result was the creation of GlomBase and GlomNet.13 GlomBase identified over 300 novel transcripts having elevated glomerular expression but with ill-defined function. The need for an efficient, reliable, and relevant method to evaluate these candidate genes in determining their potential for interrogating glomerular disease is crucial. One such relevant animal model that has already proven invaluable in providing data for functional studies in a number of organ systems is the zebrafish (Danio rerio).4,5

A systematic investigation into the role these genes may play in glomerular development and disease is currently underway. A recent article originating from the Tryggvason group identified the epithelial polarity gene, crumbs (crb2b), as having a critical role in maintaining the integrity of the podocyte slit diaphragm.6 This article highlighted the usefulness of the zebrafish in obtaining functional data when interrogating a specific gene. In the current issue of JASN, Nishibori et al. report on another one of the more than 300 genes originally identified by this group.7

Glucocorticoid-induced transcript 1, GLCCI1, is expressed in the glomerulus of the mouse kidney at an elevated level, according to their GlomBase and GlomChip data.8 In the current article, this group confirms the original data, first with an in vitro analysis, followed by immunohistochemistry. Their findings clearly show GLCCI1 expression in the glomerulus, and more precisely, using immunogold EM, in the foot processes of podocytes. Zebrafish glcci1 shares considerable sequence identity with both mouse and human GLCCI1, and Nishibori et al. demonstrate that glcci1 expression becomes elevated at the precise time that the zebrafish slit diaphragm matures.

According to previous studies, the glomerulus of the zebrafish pronephros begins to mature and starts to filter the embryonic blood at approximately 48 h postfertilization.912 Functional studies using zebrafish were also performed, and disrupting the expression of glcci1 using antisense oligonucleotide morpholinos (MO)13 leads to embryonic phenotypes suggestive of kidney failure. The most prominent phenotype is edema, a sign of fluid accumulation in the developing embryo. The beauty of using the zebrafish is that the efficacy of the MO treatment can be tested and measured using reverse transcriptase PCR (RT-PCR)—even on a single embryo displaying the phenotype of interest. Histologically, these glcci1 morphants have an abnormal looking glomerulus, with dilated capillary loops and a widened Bowman's space when compared to untreated embryos. At the ultrastructural level, there is evidence of podocyte damage in the form of foot process effacement. Importantly, it was demonstrated in a straightforward manner that the morphants have a damaged filtration barrier. Although used for decades in determining and measuring the severity of proteinuria in mammals, a simple protein blot has never been used for this purpose in zebrafish.

These experiments represent a major step forward in streamlining functional studies when using the zebrafish to study glomerulular or podocyte-specific disease-related genes. Early work in this area relied on the labor-intensive and time-consuming process of injecting fluorescently conjugated dextrans into the blood supply of the embryos under investigation (which could include embryos that were genetically mutated, previously injected with MOs or mRNA, or treated with chemicals/toxins/small molecules), followed by histologic examination of the pronephric tubules for evidence of a filtration barrier breach.9,1416

Work by several groups has made strides in improving and streamlining these functional assays, including such strategies as using real-time monitoring of fluorescent dye clearance from the blood stream of injected embryos.15 With the relative ease in generating transgenic zebrafish lines, even more convenient models are in the pipeline. These new models, like the one presented by Nishibori et al., promise the elimination of the necessity for fluorescently labeled dextran injections. The community eagerly awaits the development of an ELISA-based screening model, where fish urine can almost instantaneously be checked for signs of proteinuria.

Nishibori et al. use a relatively inexpensive and quick technique to determine whether the embryonic glomerular filtration apparatus is intact. Proof of concept for using such a strategy was demonstrated by comparing the fish water (containing the fish urine) from nephrin-MO-injected embryos. Nephrin MO treatment has previously been shown to cause severe morphologic and functional damage to the kidneys of zebrafish embryos.9 Albeit not as severe as the nephrin morphants, glcci1 morphants show evidence of proteinuria using this protein gel system. The filtration barrier of the embryonic glomerulus should exclude proteins larger than 70 kD, but proteinuric fish excrete detectable levels of proteins in the range of 150 kD. When fish urine was analyzed using mass spectrometry sequencing, it was found to contain mostly Vitellogenin and Vitellogenin-like proteins. As explained by the authors, Vitellogenin is a nutrient transport protein found in the yolk and blood of embryos as well as in the serum of adult fish.

Another interesting point of this study lies in new questions that arise from it. What does the discovery of Glucocorticoid-induced transcript 1 mean for the clinical understanding of steroid-sensitive and resistant glomerular disease? Is there a future link to be discovered that connects minimal change disease (MCD) with the downregulation of GLCCI1 in patients? What are the protein interactors and precise modus operandi of Glucocorticoid induced transcript 1? The fact that we now raise these questions on the heels of these novel mechanistic studies in fish clearly shows that we have to pay increasing attention to, and give credit for, the use of this organism when studying human-related processes of kidney disease17 or novel glomerular disease-related genes. With the refinement of functional screening methods in zebrafish, the list of these glomerular disease-related genes is on the verge of exploding, and GLCCI1 joins the likes of cofilin-1,16lat3,18crb2b,6CAR,19 and trpc6.20


J.R. is listed as an inventor on pending and issued patents related to proteinuric kidney disease and stands to gain royalties from future commercialization. J.R. is a consultant and Scientific Board Advisor for J&J, Abbott, Pfizer, Genzyme, Questcor Pharmaceuticals, and Hoffmann-La Roche. Both authors acknowledge the support from the Katz Family Fund.

Published online ahead of print. Publication date available at

See related article, “Glcci1 Deficiency Leads to Proteinuria” on pages 2037–2046.


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Copyright © 2011 The Authors. Published by Wolters Kluwer Health, Inc. All rights reserved.