Prevalence and Outcomes of Cryptococcal Antigenemia in HIV-Seropositive Patients Hospitalized for Suspected Tuberculosis in Uganda

Andama, Alfred O. MSc*,†,‡; den Boon, Saskia PhD*; Meya, David MBChB, MMed†,‡,††; Cattamanchi, Adithya MD§; Worodria, William MBChB, MMed, PhD*,†,‡; Davis, J. Lucian MD§; Walter, Nicholas D. MD; D. Yoo, Samuel MD; Kalema, Nelson MBChB*; Haller, Barbara MD, PhD#; Huang, Laurence MD§,**; on behalf of the International HIV-Associated Opportunistic Pneumonias (IHOP) Study

JAIDS Journal of Acquired Immune Deficiency Syndromes:
doi: 10.1097/QAI.0b013e3182926f95
Clinical Science

Background: Cryptococcal infection occurs in HIV-seropositive patients and is associated with high mortality. However, limited information is available on the prevalence and outcomes of cryptococcal antigenemia among hospitalized HIV-seropositive patients in sub-Saharan Africa.

Objectives: To determine the prevalence of and risk factors for cryptococcal antigenemia among HIV-seropositive patients presenting to Mulago Hospital (Kampala, Uganda) with unexplained cough ≥2 weeks and suspected tuberculosis (TB) and also to determine if antigenemia is associated with an increased mortality.

Methods: Between September 2009 and September 2010, we enrolled consecutive HIV-seropositive adults hospitalized at Mulago Hospital with cough ≥2 weeks and suspected TB. Banked serum was tested for cryptococcal antigen. We compared demographic and clinical characteristics, and 2-month mortality in patients with and without cryptococcal antigenemia.

Results: Of 563 HIV-seropositive patients, 32 (5.7%) were cryptococcal antigen (CrAg) positive. None had Cryptococcus neoformans detected on fungal culture of bronchoalveolar lavage fluid (n = 116). CrAg-positive patients had a lower median CD4 count compared with CrAg-negative patients (25 vs. 55 cells/μL, P = 0.02), and a substantial proportion of CrAg-positive patients also had concurrent TB (31%). A positive CrAg test was not associated with increased mortality during the 2-month follow-up period (hazard ratio: 0.99, 95% confidence interval: 0.63 to 1.54, P = 0.95) after adjusting for CD4 count and antiretroviral therapy use at enrollment and/or follow-up.

Conclusions: Occult cryptococcal antigenemia occurs commonly among hospitalized HIV-seropositive patients with suspected TB. CrAg testing should be considered in hospitalized HIV-seropositive patients with CD4 count <50 cells/μL, coupled with longer follow-up to evaluate the diagnostic value of CrAg and therapeutic interventions in patients with asymptomatic cryptococcal antigenemia.

Author Information

*Makerere University–University of California, San Francisco (MU-UCSF) Research Collaboration, Kampala, Uganda;

Department of Medicine, College of Health Sciences, Makerere University, Kampala, Uganda;

Department of Medicine, Mulago National Referral Hospital, Kampala, Uganda;

§Division of Pulmonary and Critical Care Medicine, University of California, San Francisco, San Francisco, CA;

Division of Pulmonary Sciences and Critical Care Medicine, University of Colorado, Denver, Aurora, CO;

Health Tutors' College Mulago, Kampala, Uganda;

#Department of Laboratory Medicine, University of California, San Francisco, San Francisco, CA;

**HIV/AIDS Division, University of California, San Francisco, San Francisco, CA; and

††Division of Infectious Diseases and International Health, University of Minnesota, MN.

Correspondence to: Alfred O. Andama, MSc, Department of Medicine, School of Medicine, Makerere University College of Health Sciences, Old Mulago Hill Road, New Mulago Hospital Complex, P.O Box 7051, Kampala, Uganda (e-mail:

Supported by grant numbers K24 HL087713 (L. Huang), R01 HL 090335 (L. Huang), U01 AI089244-01 (COAT study), K23 AI080147 (J. L. Davis), K23 HL094141 (A. Cattamanchi) from the National Institutes of Health.

The authors have no conflicts of interest to disclose.

Supplemental digital content is available for this article. Direct URL citations appear in the printed text and are provided in the HTML and PDF versions of this article on the journal's Web site (

Received May 06, 2012

Accepted March 05, 2013

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Cryptococcosis is a serious fungal infection that is a common cause of meningitis and death among patients with advanced HIV infection. Pneumonia with or without accompanying meningitis and isolated cryptococcal antigenemia are also common presentations. Recent estimates suggest that there are about 1 million new cases and at least 500,000 deaths annually due to HIV-associated cryptococcosis worldwide.1 In more affluent countries, the incidence of HIV-associated cryptococcosis has decreased dramatically since the introduction of antiretroviral therapy (ART),2 and mortality associated with this disease is generally <10%. Although the incidence has also decreased in sub-Saharan Africa with the increased use of ART,3 cryptococcosis remains a significant cause of morbidity and mortality.4

The burden of cryptococcosis has previously been reported to be particularly high in patients with or suspected of having pulmonary tuberculosis (TB). In South Africa, cryptococcal disease was associated with 75% of deaths from opportunistic infections in gold miners with pulmonary TB.5 However, few previous studies have evaluated the burden and impact of cryptococcosis among hospitalized HIV-seropositive TB suspects in sub-Saharan Africa.

In sub-Saharan African settings, hospitalized HIV-seropositive patients without neurological symptoms are rarely tested or treated for cryptococcosis. Thus, the diagnosis may be missed in patients with isolated cryptococcal antigenemia. We hypothesized that unrecognized cryptococcosis may be prevalent in this population and may contribute to early mortality.

Therefore, we performed cryptococcal antigen testing on banked serum specimens from consecutive HIV-seropositive adult patients (older than 18 years) with suspected TB (defined as a cough ≥2 weeks) at Mulago Hospital in Kampala, Uganda, who had been enrolled between September 2009 and September 2010. These patients were not suspected of cryptococcosis by their treating clinicians. Our objectives were to determine the prevalence and risk factors associated with cryptococcal antigenemia among HIV-seropositive patients presenting with cough. We also determined if cryptococcal antigenemia is associated with an increased mortality.

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Participants and Procedures

The current study is a sub-study of the International HIV-associated Opportunistic Pneumonias (IHOP) Study, a prospective observational cohort. The general study protocol has been previously described in detail.6,7 In brief, patients provided written informed consent and were interviewed to obtain demographic and clinical data. Chest radiographs and blood were obtained at enrollment. Blood was used for HIV testing and, if HIV positive, for CD4+ T-lymphocyte count measurement. Patients submitted 2 sputum specimens (1 spot and 1 early morning) for acid-fast bacilli smear and culture on Lowenstein–Jensen media, and those with negative sputum acid-fast bacilli results (using Ziehl–Neelsen method) were referred for bronchoscopy with bronchoalveolar lavage (BAL). Bronchoscopy included inspection for endobronchial Kaposi sarcoma. BAL fluid was examined for mycobacteria, Pneumocystis jirovecii (using modified Giemsa, Diff Quik method), Cryptococcus neoformans, and other fungi (using Sabouraud medium). The follow-up period was 2 months after enrollment to assess vital status. After this 2-month follow-up period, final diagnoses were assigned by 2 study doctors according to prespecified criteria (see Appendix, Supplemental Digital Content,, which included TB culture results, response to treatment, and other previously collected data.6,7

At time of enrollment, 3–4 mL of blood was collected from each patient into a vacutainer tube with clot activator and processed for serum as follows: blood was allowed to clot at room temperature for 30 minutes and centrifuged at 3000 rpm for 5 minutes. The resulting serum was used to confirm HIV status (200 µL) and the remainder (0.5–1.0 mL) was promptly transferred into cryovials and stored at −20°C. For this study, banked serum was thawed and tested for cryptococcal antigen.

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Serum Cryptococcal Antigen Testing

Cryptococcal antigen (CrAg) testing was performed by a single individual (A. O. Andama) who was blinded to all clinical and microbiologic data. CrAg testing was performed using a commercially available test kit (Immuno-Mycologics, Inc., Norman, OK) according to the manufacturer's instructions. Testing included positive and negative controls with each batch, and testing was repeated if the results were indeterminate (ie, failed positive or negative control). The qualitative test result was interpreted as nonreactive (negative) if it showed a smooth milky suspension with the absence of agglutination and reactive (positive) if it showed distinct large clumps against a clear or lightly milky background or small but definite clumps against a milky background. CrAg titers were subsequently obtained in reactive specimens using standard serial dilutions. The titer of a particular sample was taken to be the highest dilution that showed agglutination.

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Sample Size Determination and Data Analysis

The first objective of this study (to determine the prevalence of cryptococcal coinfection in HIV-seropositive patients with suspected TB in Mulago Hospital) was used for the sample size and precision estimates. An 8% prevalence was reported in a cohort of adult ART-naive AIDS patients who were subsequently started on ART in Kampala, Uganda.8 Using the Kish and Leslie formula,9 452 serum samples would provide a prevalence estimate with 90% precision and a 95% confidence interval (CI). However, to further increase our precision, we elected to analyze all 563 available banked serum samples from our HIV-seropositive patients.

Data analysis was performed using STATA release 10 (Stata Corporation, College Station, TX). We compared categorical variables using the χ2 or Fisher exact tests, and continuous variables using Student t test or the Mann–Whitney rank sum test. We performed a backwards multivariate logistic regression analysis to determine factors associated with cryptococcal antigenemia. Variables that did not contribute significantly to the model, defined as a P value <0.05, were removed from the model. We conducted survival analysis to determine whether cryptococcal antigenemia is independently associated with mortality. We controlled for both CD4 count and ART use, variables that are known to impact survival. We defined significance in reference to the probability of a 2-tailed type I error (P value) <0.05.

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Ethical Considerations

Written informed consent was obtained from study participants and included permission to use banked specimens collected at enrollment for future studies. The Makerere University Faculty of Medicine Research and Ethics Committee, Mulago Hospital Institutional Review Board, the Uganda National Council for Science and Technology, and the University of California San Francisco Committee on Human Research approved the protocol.

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Patient Characteristics

Of 753 adult patients with cough ≥2 weeks and suspected TB who were enrolled, 563 tested positive for HIV antibodies and had banked serum available for this study (Fig. 1). Two-month follow-up data were available for 430 patients. There were no significant differences between patients with and patients without 2-month follow-up data available for the following variables: gender (P = 0.71), median age (P = 0.35), median CD4 count (P = 0.24), ART use on admission (P = 0.88), cotrimoxazole prophylaxis use on admission (P = 0.20), fever (P = 0.87), weight loss >5 kg (P = 0.76), dyspnea (P = 0.78), or a final diagnosis of TB (P = 0.12). Compared with patients who completed the 2-month follow-up period, patients who were lost to follow-up less often knew their HIV status at enrollment (59% vs. 69%, P = 0.04) and more often had an unknown diagnosis for their cough (32% vs. 13%, P < 0.001).

Of the 563 HIV-seropositive patients who were included in this study, the majority were female (n = 301, 53%) and young [median age = 33 years, interquartile range (IQR) = 28–40 years] (Table 1). Approximately two-thirds (67%) were known to have HIV infection at the time of their presentation, and the remaining one-third had HIV infection diagnosed during this hospitalization. Most patients had advanced HIV disease (median CD4 count = 51 cells/μL, IQR = 16–171 cells/μL). Despite this, only 28% (n = 104) of the 375 patients known to have HIV infection were receiving ART at the time of presentation; 73% (n = 273) were receiving cotrimoxazole for Pneumocystis pneumonia prophylaxis, and none were receiving fluconazole. The majority of patients presented with fever (88%), weight loss >5 kg (73%), and dyspnea (56%). Cough, which was an inclusion criterion for the prospective study, was present in 100%. In most cases, these nonspecific complaints were determined to be due to TB (60%). Other common diagnoses included bacterial pneumonia (11%), Pneumocystis pneumonia (1%), and pulmonary Kaposi sarcoma (2%). A substantial proportion of patients had an unknown final diagnosis (17%).

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Prevalence of and Risk Factors for Cryptococcal Antigenemia

Overall, 32 (5.7%) of the 563 patients had a positive CrAg test. Among the 116 patients who underwent bronchoscopy, none had C. neoformans detected on fungal culture of the BAL fluid. Thus, if CrAg testing had been done prospectively, the positive serum CrAg result would have represented the sole diagnosis for cryptococcal disease.

All patients with a positive CrAg had a CD4 count <200 cells/μL. The CrAg-positive patients had a lower median CD4 count (25 cells/μL, IQR: 8–77 cells/μL) compared with those who had a negative CrAg test (55 cells/μL, IQR: 18–172 cells/μL, P = 0.02) (Table 1). A substantial proportion of CrAg-positive patients had concurrent TB (31%) and, thus, TB is a frequent co-pathogen in patients with cryptococcemia. The proportion of CrAg-positive patients who had TB was lower than the proportion in CrAg-negative patients (31% vs. 62%, P = 0.001). Other clinical factors including gender, age, previous diagnosis of HIV infection, and taking ART or cotrimoxazole prophylaxis at admission were all not associated with a positive CrAg test. Presenting symptoms were also similar in CrAg-positive and CrAg-negative patients. In the final multivariate model, a CD4 count of <50 cells/μL was significantly associated with increased odds of cryptococcal antigenemia (adjusted odds ratio = 2.38, P = 0.034), whereas a diagnosis of TB was associated with a lower odds of antigenemia (adjusted odds ratio = 0.24, P = 0.001) (Table 2).

Overall, 10 CrAg-positive patients were diagnosed with TB and 8 were classified as having an unknown final diagnosis but potentially having disseminated cryptococcal infection as the etiology of their presentation. In the absence of a specific diagnosis of cryptococcosis, 6 patients (2 CrAg positive and 4 CrAg negative) were treated with fluconazole during hospitalization because they had oral thrush or possible esophageal candidiasis and were discharged on this medication. CrAg-positive patients were more often initiated on empiric fluconazole treatment during their hospitalization compared with CrAg-negative patients (7% vs. 1%, P = 0.002).

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Cryptococcal Antigenemia and Factors Associated With 2-Month Mortality

Among the 430 patients with 2-month follow-up data available, 310 (72.1%) were found to be alive and 120 (27.9%) were determined to have died (Fig. 1). Of the CrAg-positive patients, 37% had died at 2-month follow-up compared with 27% of the CrAg-negative patients, but this difference was not statistically significant (P = 0.28). In survival analysis, there was no significant difference between CrAg-positive and CrAg-negative patients in time to death (Fig. 2, P = 0.47). In bivariate analysis, we did not find a significant association between CrAg positivity and 2-month mortality [hazard ratio (HR): 1.0, 95% CI: 0.64 to 1.55, P = 1.0], although we could not exclude the possibility of a clinically important increase or decrease in mortality because of the imprecision of our estimate. After adjusting for CD4 count, ART use at admission and/or follow-up, and TB diagnosis and/or unknown diagnosis, the association between CrAg result and mortality remained nonsignificant (HR: 0.99, 95% CI: 0.63 to 1.55, P = 0.98).

Among patients with a positive CrAg test, we compared mortality in 21 patients with low titers (titer ≤ 1:512) with mortality in 11 patients with high titers (titer > 1:512). CrAg titer was neither significantly associated with mortality in bivariate analysis (HR: 0.58, 95% CI: 0.17 to 1.97, P = 0.38) nor after adjusting for CD4 count, ART use at admission and/or follow-up, and TB diagnosis and/or unknown diagnosis (HR: 1.02, 95% CI: 0.22 to 4.79, P = 0.98).

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In this study, we found an overall cryptococcal antigenemia prevalence of 5.7% in HIV-infected adults hospitalized at Mulago Hospital (Kampala, Uganda) with cough ≥2 weeks and suspected TB. None of the 116 patients who underwent bronchoscopy as part of their diagnostic evaluation had C. neoformans detected on fungal culture of the BAL fluid. We did not identify a difference in mortality or time to death between CrAg-positive and CrAg-negative patients at 2 months of follow-up.

The moderate prevalence of cryptococcosis observed in this cohort is lower than that reported among hospitalized patients in South Africa and Cambodia10,11 where cryptococcal antigenemia prevalence was reported to be 13% and 20%, respectively. The lower rates that we observed may be due to the fact that the majority of patients enrolled in these previous studies were terminally ill and had symptoms of cryptococcosis. In contrast, our study selected a different population: although hospitalized, patients in our cohort did not have Cryptococcus-specific symptoms and were not clinically suspected to have cryptococcal infection. Furthermore, patients with an altered mental status or confusion were excluded from our study because they were unable to provide informed consent for study participation. Therefore, patients with symptomatic cryptococcal neurologic disease would not have been enrolled. Surprisingly, the prevalence that we noted in our hospitalized cohort was comparable to cryptococcal antigenemia prevalence previously described among asymptomatic HIV-seropositive outpatients in Uganda. In the Infectious Diseases Institute in Kampala and in a rural community clinic setting in Tororo, cryptococcal antigenemia prevalences were 8% and 5.8%, respectively.8,12

None of the CrAg-positive patients who underwent bronchoscopy in our prospective study were diagnosed with concurrent cryptococcal pneumonia. This finding was unexpected as we found C. neoformans in 11.4% of HIV-infected patients undergoing bronchoscopy in a previous cohort (September 2007 through July 2008) of 132 patients with cough ≥2 weeks and suspected TB.6 Nevertheless, our findings demonstrate that cryptococcal antigenemia can occur in the absence of cryptococcal pneumonia based on BAL culture results.

Even in the absence of diagnosis and specific treatment of cryptococcosis, CrAg-positive patients in our cohort were not more likely to die before 2-month follow-up than CrAg-negative patients. These findings differ from other studies that reported on HIV-positive patients with and without cryptococcal antigenemia. Jarvis et al10 reported on patients accessing an ART program in South Africa and found that CrAg-positive patients were at far higher risk of mortality than antigen-negative patients during a 1-year follow-up period (HR = 4.75, 95% CI: 2.6 to 8.8, P < 0.001). Similarly, French et al3 reported a poor survival of patients after diagnosis of cryptococcal antigenemia (median survival 26 days, range 0–138 days), although this study was done in the period before ART was available in Africa. The fact that we failed to show an association with mortality may be because we had a relatively small sample size and a comparatively short follow-up period.

Overall, CrAg testing identified 32 patients with cryptococcal antigenemia, including 10 with concurrent TB and 8 classified as having an unknown final diagnosis but potentially having disseminated cryptococcal infection as the etiology of their presentation. In these individuals, CrAg testing at the time of presentation may have been beneficial. However, evaluation of the possible benefits of such an intervention requires an understanding of the clinical course of patients with cryptococcal antigenemia. Cryptococcal antigenemia in the context of advanced HIV infection has been assumed to indicate disseminated disease, and the progression to symptomatic cryptococcosis has been thought to be inevitable unless appropriate antifungal treatment is given.13,14 During our relatively short 2-month follow-up period, we were unable to confirm symptomatic cryptococcosis in any of these individuals, and it is unclear whether a longer follow-up period would have detected subsequent progression in these individuals.

Despite the lack of association between cryptococcal antigenemia and mortality in our study, the preponderance of evidence suggests that prospective testing for cryptococcal antigenemia in severely immunosuppressed HIV-seropositive patients with suspected TB in the absence of previous cryptococcal disease should have a role in the diagnostic evaluation. With the new point-of-care lateral flow assay for cryptococcal antigen, this testing could even be performed at peripheral health facilities that the majority of patients visit before hospitalization.15 In addition, such testing with subsequent intervention may prevent unmasking of subclinical cryptococcal infection that could present as meningitis or pneumonitis after ART initiation. Screening for serum cryptococcal antigen is highly sensitive and specific,16 and Meya et al,8 described the cost benefit of this strategy in preventing death in HIV-infected patients with CD4 counts ≤100 cells/µL. This screening strategy may also be beneficial in hospital-based cohorts such as ours that are composed of HIV-infected patients with advanced immunosuppression and high 2-month mortality.7

Our study had limitations. First, the screening test used (CrAg) does not differentiate between acute and old infections. Cryptococcal antigen can persist in the blood up to 48 months after successful treatment for cryptococcosis.17 It is therefore possible that some of the patients who tested positive might have had previous cryptococcal infection because we mainly relied on patient recall to rule out any history of cryptococcal infection and fluconazole use. That said, none of the patients reported current fluconazole use at the time of hospital admission. Second, the short period (2 months) of follow-up and the fact that the CrAg analyses were conducted 6 months after the last patient was seen made it impossible to determine if the cases we identified were either disseminated cryptococcal infection that progressed or transient pneumonitis but with negative BAL cultures.

In summary, we report a moderately high prevalence (5.7%) of cryptococcal antigenemia among HIV-infected patients who were hospitalized with suspected TB. Cryptococcal disease was not suspected in these patients before CrAg testing, and none of the CrAg-positive patients who underwent bronchoscopy had concurrent cryptococcal pneumonia diagnosed. As a result, the positive CrAg test may have represented the sole diagnosis of disseminated cryptococcal infection, and our results suggest a potential role for serum CrAg screening in this hospitalized population. No significant association between CrAg positivity and 2-month mortality among patients suspected of TB was established but longer-term follow-up studies are needed.

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The authors would like to thank Sylvia Kaswabuli, Patrick Byanyima, John Kiidha, Rachel Kyeyune, and Leatitia Kampiire for enrolling and caring for the patients included in this study. The authors would also like to thank the Mulago Hospital administration and staff for their approval and support of the research.

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Cryptococcus neoformans; antigenemia; tuberculosis; HIV; AIDS

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